Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829762.1_cds_XP_016503893.1_17396
CDS Infomation

[gene=LOC107821936] [db_xref=GeneID:107821936] [protein=trigger factor-like protein TIG, Chloroplastic] [protein_id=XP_016503893.1] [location=complement(join(9783..9860,10075..10170,10694..10843,10929..11009,11446..11538,11652..11744,12314..12468,12589..12679,13603..13786,14558..14646,14982..15110,15398..15481,16677..16976))] [gbkey=CDS]
Sequence

ATGGCAACGCCAATTGCAATCCAATTCAAGCCCTCCATTCTCTCATTTCTATCACCTAAT
TCCTCATCTGTTACTACAAAAGCTCATTTTCTTCAACCCAATGATAAATTCTTGGTCTCT
TCTCCTCTCAAACAAATAGTACCCAGTTTATCTTCCCGCCATTTCTCCTTTCTTCAACAG
CAGCAGCTTTCTTCAACTCGTTTCGTAGCCTCAGCAGCTCCTGGCGTTGCTGATACTGTT
GAAAAAGACAAACTTCCAGCTGATATTCATGTTACTGAAACCCAGGAACCCAATTCCAGA
GTCAGGTTGACTGTAGAAGTTCCAACTGTGGTATGCGAGGACTGCTATGGAAGAGTCATA
AGAGAGTTCATGAAACACTCAAAGGTTCCTGGATTTCGTCCTGGGAAGAATGTTCCAGAA
GATATCCTCGTTGGCTATGTTGGGAAGCAAAATGTTCAAAAAGCTGCAGTCGAGTCTATT
CTGAAAAGAACACTTCCACATGCCATGTCTTCGATTACTGGAAAGGCATTGGAAGACTCA
ATTCGCATTGCGACCAAATTCGCAGACATGGAAAAGACCTATGTGTCTACGAATTCCTTG
AGGTATGATGTGATTGTCGATGTGGCTCCTGAAATCAAGTGGAAACCTGACAATGCATAT
AAGAATCTTAAGGTTGTTGTTGAGCTTGACAGTGATATGGATGCTCAGACAGCTTCAGAA
AAAGAATTTAAACGGCGTCACAAGTCTCTGGGTGCATTGAAAATTGTTACTGACCGGGGT
TTACAGGTTGGCGATGTTGCAGTGATTGATATATCAGCAACTACAATTGAACAAGATGGA
TCAGATGCTAAAAGCATACCTGCTGCAGAGAGTAAAGGTTTCAACTTTGACACAGAAGAT
GGAGATAATGTCCTTCCCGGTTTTCTTGACTCAATTATTGGTATTAAACGTGGTGAAACG
AAGTCATTCCCTTTGGTATTTCCAGACTCATGGAAACAAGAGGATCTTCGTGGTGTTCAT
GCTCAATTCACAGTTGAATGTAAAGAACTGTTCTACAGAGATTTGCCTGAGGTGAATGAC
TCGATTGCTGATAAGCTTATCCCGGGATGCAGCTCCATTGAGGAGGTAAAGCAAGCATTG
CTACAAAGATGTCTTGAAGTTGAACAGGCAGCTAAAGACCAAGCAACTGATAATGCCATC
TTAGACCAGCTATACAAGATGGTTGAAGTTGATATTCCTCAATCTCTCTTCGAAGAGCAA
GGAAGACAACTCTATGGAGCTCAACTTTTACAATTGCAGGCAAATATGAAACTGAGCGAA
CAGCAGCTGGCATCGTTATCAAGCCCAAGGGCCGTGAATGAGTTCCTTGAAGCACAAAAA
GAAAATATAACAAGTATTATAAAGCAAAATTTAGCTGTTGGTGACATATTTATACGTGAA
AATTTGCAGTTTTCAACGGAGGAGCTAGTGAAAGAGGTTCAGAACTCAATTGAAGAATTC
CAAAAGTCTCAACAGGAGTACGATGAGGACCGAGTTAAGCAACAGGTACAAGAAGTACTT
GAAGGGGCTAAAGTACTTGAATGGCTGAGGGAAAATGCAGATATTCAGTACATAACTAGG
TGA

Peptide Sequence

PEP ID

XP_016503893.1
PEP Infomation

PREDICTED: trigger factor-like protein TIG, Chloroplastic [Nicotiana tabacum]
Sequence

MATPIAIQFKPSILSFLSPNSSSVTTKAHFLQPNDKFLVSSPLKQIVPSLSSRHFSFLQQ
QQLSSTRFVASAAPGVADTVEKDKLPADIHVTETQEPNSRVRLTVEVPTVVCEDCYGRVI
REFMKHSKVPGFRPGKNVPEDILVGYVGKQNVQKAAVESILKRTLPHAMSSITGKALEDS
IRIATKFADMEKTYVSTNSLRYDVIVDVAPEIKWKPDNAYKNLKVVVELDSDMDAQTASE
KEFKRRHKSLGALKIVTDRGLQVGDVAVIDISATTIEQDGSDAKSIPAAESKGFNFDTED
GDNVLPGFLDSIIGIKRGETKSFPLVFPDSWKQEDLRGVHAQFTVECKELFYRDLPEVND
SIADKLIPGCSSIEEVKQALLQRCLEVEQAAKDQATDNAILDQLYKMVEVDIPQSLFEEQ
GRQLYGAQLLQLQANMKLSEQQLASLSSPRAVNEFLEAQKENITSIIKQNLAVGDIFIRE
NLQFSTEELVKEVQNSIEEFQKSQQEYDEDRVKQQVQEVLEGAKVLEWLRENADIQYITR

Transcript Sequence

Gene sequence data has not been registered.